Yes!
Many times. And usually the solution (for me, anyway) is to ask the characters what happens next, much as Bakasi suggests. They nearly always perk up and offer a response, and if it's not workable they're generally willing to offer other suggestions.
I've ended up with many scenes on the cutting room floor because of length, out-of-character action, scene is good doesn't fit in the narrative flow, doesn't move the narrative forward, and frowning muses. I would be amazed if something like this did not happen to every writer on occasion. And judging from my sampling of writing books, it happens a lot.
Now if there were only some good books on how to handle recalcitrant muses...